ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5gs8A2 - ECOD Domain | ECOD

ECOD/Domains/e5gs8A2

e5gs8A2

UID: 002092617

PDB

Range: A:53-170
PDB: 5GS8 chain A(all domains)
UniProt: A0A0B6VPP7 (all domains)

Molecule: Beta-lactamase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Beta-lactamase2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyBeta-lactamase2(4019.1.1.6)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13354Beta-lactamase2

Beta-lactamase enzyme family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 5GS8 RCSB PDB: 5GS8 PDBe: 5GS8 UniProt: A0A0B6VPP7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure