ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gwaA2 - ECOD Domain | ECOD

ECOD/Domains/e5gwaA2

e5gwaA2

UID: 002092652

PDB

Range: A:53-170
PDB: 5GWA chain A(all domains)
UniProt: A0A0B6VPP7 (all domains)

Molecule: Beta-lactamase

3D Structure

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Related Domains

Browse other domains in Beta-lactamase2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyBeta-lactamase2(4019.1.1.6)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal
(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamideNXL

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

PF13354Beta-lactamase2

Beta-lactamase enzyme family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 5GWA RCSB PDB: 5GWA PDBe: 5GWA UniProt: A0A0B6VPP7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.