ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k30A2 - ECOD Domain | ECOD

ECOD/Domains/e5k30A2

e5k30A2

UID: 002092688

PDB

Range: A:2-261
PDB: 5K30 chain A(all domains)
UniProt: A0A0A5P8W7 (all domains)
Gene: megL

Molecule: Methionine gamma-lyase

3D Structure

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Related Domains

Browse other domains in Cys_Met_Meta_PP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyCys_Met_Meta_PP(7577.1.1.7)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01053Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 5K30 RCSB PDB: 5K30 PDBe: 5K30 UniProt: A0A0A5P8W7

Downloads

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