ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m8wA1 - ECOD Domain | ECOD

ECOD/Domains/e5m8wA1

e5m8wA1

UID: 002092874

PDB

Range: A:323-462
PDB: 5M8W chain A(all domains)
UniProt: W6EQP0 (all domains)

Molecule: Tetrachloroethene reductive dehalogenase catalytically active subunit

3D Structure

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Related Domains

Browse other domains in Fer4_16 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4_16(205.1.1.21)

Ligands

in contact, ≤ 4 Å

Parachlorophenol4CH
drugDrugBank DB13154
NORPSEUDO-B12BVQ
Iron/sulfur clusterSF4

Pfam Families

PF13484Fer4_16

4Fe-4S double cluster binding domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 5M8W RCSB PDB: 5M8W PDBe: 5M8W UniProt: W6EQP0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.