ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m8wA2 - ECOD Domain | ECOD

ECOD/Domains/e5m8wA2

e5m8wA2

UID: 002092875

PDB

Range: A:3-322
PDB: 5M8W chain A(all domains)
UniProt: W6EQP0 (all domains)

Molecule: Tetrachloroethene reductive dehalogenase catalytically active subunit

3D Structure

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Related Domains

Browse other domains in Dehalogenase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFMN-dependent nitroreductase-like(304.103)

TT-groupFMN-dependent nitroreductase-like(304.103.1)

FFamilyDehalogenase(304.103.1.4)

Ligands

in contact, ≤ 4 Å

Parachlorophenol4CH
drugDrugBank DB13154
BenzamidineBEN
NORPSEUDO-B12BVQ

Pfam Families

PF13486Dehalogenase

Reductive dehalogenase subunit

ClanCL0529FMN-dep-NRtase

External Links

ECOD PDB View: 5M8W RCSB PDB: 5M8W PDBe: 5M8W UniProt: W6EQP0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Iron/sulfur clusterSF4

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.