ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m92B1 - ECOD Domain | ECOD

ECOD/Domains/e5m92B1

e5m92B1

UID: 002092900

PDB

Range: B:7-322
PDB: 5M92 chain B(all domains)
UniProt: W6EQP0 (all domains)

Molecule: Tetrachloroethene reductive dehalogenase catalytic subunit PceA

3D Structure

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Related Domains

Browse other domains in Dehalogenase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFMN-dependent nitroreductase-like(304.103)

TT-groupFMN-dependent nitroreductase-like(304.103.1)

FFamilyDehalogenase(304.103.1.4)

Ligands

in contact, ≤ 4 Å

BenzamidineBEN
NORPSEUDO-B12BVQ
Iron/sulfur clusterSF4
2,4-bis(bromanyl)phenolY8I

Pfam Families

PF13486Dehalogenase

Reductive dehalogenase subunit

ClanCL0529FMN-dep-NRtase

External Links

ECOD PDB View: 5M92 RCSB PDB: 5M92 PDBe: 5M92 UniProt: W6EQP0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.