ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xdqQ1 - ECOD Domain | ECOD

ECOD/Domains/e5xdqQ1

e5xdqQ1

UID: 002093369

PDB

Range: Q:4-147
PDB: 5XDQ chain Q(all domains)
UniProt: P00423 (all domains)
Gene: COX4I1

Molecule: Cytochrome c oxidase subunit 4 isoform 1, mitochondrial

3D Structure

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Related Domains

Browse other domains in COX4 →

Classification

AArchitectureextended segments(a.20)

XX-groupMitochondrial cytochrome c oxidase subunit IV(5003)

HH-groupMitochondrial cytochrome c oxidase subunit IV(5003.1)

TT-groupMitochondrial cytochrome c oxidase subunit IV(5003.1.1)

FFamilyCOX4(5003.1.1.1)

Ligands

in contact, ≤ 4 Å

Decyl-beta-d-maltopyranosideDMU
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV
TristearoylglycerolTGL

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

Cytochrome c oxidase subunit IV

External Links

ECOD PDB View: 5XDQ RCSB PDB: 5XDQ PDBe: 5XDQ UniProt: P00423

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.