ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nuvA1 - ECOD Domain | ECOD

ECOD/Domains/e5nuvA1

e5nuvA1

UID: 002093821

PDB

Range: A:307-607
PDB: 5NUV chain A(all domains)
UniProt: Q676U5 (all domains)
Gene: ATG16L1

Molecule: Autophagy-related protein 16-1

3D Structure

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Related Domains

Browse other domains in WD40 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40(5.1.4.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((R,R)-2,3-BUTANEDIOL)

(R,R)-2,3-BUTANEDIOLBU3

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5NUV RCSB PDB: 5NUV PDBe: 5NUV UniProt: Q676U5

Downloads

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