ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vr8B1 - ECOD Domain | ECOD

ECOD/Domains/e5vr8B1

e5vr8B1

UID: 002094003

PDB

Range: B:319-465
PDB: 5VR8 chain B(all domains)
UniProt: O60701 (all domains)
Gene: UGDH

Molecule: UDP-glucose 6-dehydrogenase

3D Structure

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Related Domains

Browse other domains in UDPG_MGDP_dh_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupUDPG/MGDP dehydrogenase C-terminal domain(2003.1.12)

FFamilyUDPG_MGDP_dh_C(2003.1.12.1)

Ligands

in contact, ≤ 4 Å

UDP-alpha-D-xyloseUDX
drugDrugBank DB01713

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03720UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

ClanCL0039HUP

External Links

ECOD PDB View: 5VR8 RCSB PDB: 5VR8 PDBe: 5VR8 UniProt: O60701

Downloads

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