ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vr8B2 - ECOD Domain | ECOD

ECOD/Domains/e5vr8B2

e5vr8B2

UID: 002094004

PDB

Range: B:0-212
PDB: 5VR8 chain B(all domains)
UniProt: O60701 (all domains)
Gene: UGDH

Molecule: UDP-glucose 6-dehydrogenase

3D Structure

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Related Domains

Browse other domains in UDPG_MGDP_dh_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyUDPG_MGDP_dh_N(2003.1.1.45)

Ligands

in contact, ≤ 4 Å

UDP-alpha-D-xyloseUDX
drugDrugBank DB01713

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03721UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5VR8 RCSB PDB: 5VR8 PDBe: 5VR8 UniProt: O60701

Downloads

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