ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vr8F1 - ECOD Domain | ECOD

ECOD/Domains/e5vr8F1

e5vr8F1

UID: 002094015

PDB

Range: F:319-465
PDB: 5VR8 chain F(all domains)
UniProt: O60701 (all domains)
Gene: UGDH

Molecule: UDP-glucose 6-dehydrogenase

3D Structure

Loading viewer...

Related Domains

Browse other domains in UDPG_MGDP_dh_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupUDPG/MGDP dehydrogenase C-terminal domain(2003.1.12)

FFamilyUDPG_MGDP_dh_C(2003.1.12.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
UDP-alpha-D-xyloseUDX
drugDrugBank DB01713

Shown in the structure viewer.

Pfam Families

PF03720UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

ClanCL0039HUP

External Links

ECOD PDB View: 5VR8 RCSB PDB: 5VR8 PDBe: 5VR8 UniProt: O60701

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.