ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vrxA2 - ECOD Domain | ECOD

ECOD/Domains/e5vrxA2

e5vrxA2

UID: 002094022

PDB

Range: A:92-148
PDB: 5VRX chain A(all domains)
UniProt: P06746 (all domains)
Gene: POLB

Molecule: DNA polymerase beta

3D Structure

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Related Domains

Browse other domains in DNA_pol_lambd_f →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyDNA_pol_lambd_f(102.1.1.21)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10391DNA_pol_lambd_f

Fingers domain of DNA polymerase lambda

ClanCL0198HHH

External Links

ECOD PDB View: 5VRX RCSB PDB: 5VRX PDBe: 5VRX UniProt: P06746

Downloads

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