ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gn5B1 - ECOD Domain | ECOD

ECOD/Domains/e5gn5B1

e5gn5B1

UID: 002095525

PDB

Range: B:-1-263
PDB: 5GN5 chain B(all domains)
UniProt: D3KVM3 (all domains)
Gene: gk

Molecule: Glycerol kinase

3D Structure

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Related Domains

Browse other domains in FGGY_N →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyFGGY_N(2484.1.1.6)

Ligands

in contact, ≤ 4 Å

4-[[4-(4-methoxyphenyl)piperazin-1-yl]methyl]-7,8-bis(oxidanyl)chromen-2-one6XZ

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FGGY family of carbohydrate kinases, N-terminal domain

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 5GN5 RCSB PDB: 5GN5 PDBe: 5GN5 UniProt: D3KVM3

Downloads

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