ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5gn6D1 - ECOD Domain | ECOD

ECOD/Domains/e5gn6D1

e5gn6D1

UID: 002095537

PDB

Range: D:264-511
PDB: 5GN6 chain D(all domains)
UniProt: D3KVM3 (all domains)
Gene: gk

Molecule: Glycerol kinase

3D Structure

Loading viewer...

Related Domains

Browse other domains in FGGY_C →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyFGGY_C(2484.1.1.32)

Ligands

in contact, ≤ 4 Å

4-butyl-7,8-bis(oxidanyl)chromen-2-one6Y0

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FGGY family of carbohydrate kinases, C-terminal domain

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 5GN6 RCSB PDB: 5GN6 PDBe: 5GN6 UniProt: D3KVM3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure