ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5n9xB2 - ECOD Domain | ECOD

ECOD/Domains/e5n9xB2

e5n9xB2

UID: 002095715

PDB

Range: B:417-529
PDB: 5N9X chain B(all domains)
UniProt: H6SG27 (all domains)

Molecule: Adenylation domain

3D Structure

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Related Domains

Browse other domains in AMP-binding_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyAMP-binding_C(327.5.1.2)

Ligands

in contact, ≤ 4 Å

ThreonineTHR
drugDrugBank DB00156within 5 Å only
[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (2~{S},3~{R})-2-azanyl-3-oxidanyl-butanoate8QN

Shown in the structure viewer.

Pfam Families

PF13193AMP-binding_C

AMP-binding enzyme C-terminal domain

ClanCL0531AMP-binding_C

External Links

ECOD PDB View: 5N9X RCSB PDB: 5N9X PDBe: 5N9X UniProt: H6SG27

Downloads

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Drug annotations from DrugDomain.