ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5n9xB4 - ECOD Domain | ECOD

ECOD/Domains/e5n9xB4

e5n9xB4

UID: 002095717

PDB

Range: B:331-416
PDB: 5N9X chain B(all domains)
UniProt: H6SG27 (all domains)

Molecule: Adenylation domain

3D Structure

Loading viewer...

Related Domains

Browse other domains in AMP-binding →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-barrel domain in acetyl-CoA synthetase-like proteins(4011)

HH-groupbeta-barrel domain in acetyl-CoA synthetase-like proteins(4011.1)

TT-groupbeta-barrel domain in acetyl-CoA synthetase-like proteins(4011.1.1)

FFamilyAMP-binding(4011.1.1.1)

Ligands

in contact, ≤ 4 Å

[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (2~{S},3~{R})-2-azanyl-3-oxidanyl-butanoate8QN

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

External Links

ECOD PDB View: 5N9X RCSB PDB: 5N9X PDBe: 5N9X UniProt: H6SG27

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure