ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5nvmA1 - ECOD Domain | ECOD

ECOD/Domains/e5nvmA1

e5nvmA1

UID: 002095779

PDB

Range: A:52-221
PDB: 5NVM chain A(all domains)
UniProt: O60573 (all domains)
Gene: EIF4E2

Molecule: Eukaryotic translation initiation factor 4E type 2

3D Structure

Loading viewer...

Related Domains

Browse other domains in IF4E →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTranslation initiation factor eIF4e and phosphothreonine lyase(317)

HH-groupTranslation initiation factor eIF4e and phosphothreonine lyase(317.1)

TT-groupTranslation initiation factor eIF4e and phosphothreonine lyase(317.1.1)

FFamilyIF4E(317.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Eukaryotic initiation factor 4E

ClanCL0625eIF4e

External Links

ECOD PDB View: 5NVM RCSB PDB: 5NVM PDBe: 5NVM UniProt: O60573

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure