ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ob6A1 - ECOD Domain | ECOD

ECOD/Domains/e5ob6A1

e5ob6A1

UID: 002095835

PDB

Range: A:1-129
PDB: 5OB6 chain A(all domains)
UniProt: P00698 (all domains)
Gene: LYZ

Molecule: Lysozyme C

3D Structure

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Related Domains

Browse other domains in Lys →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyLys(235.1.1.1)

Ligands

in contact, ≤ 4 Å

tris(oxidaniumylidynemethyl)-tris(oxidanyl)ruthenium9Q8
Chloride ionCL
Sodium ionNA
metal
bis(oxidaniumylidynemethyl)ruthenium(2+)

Pfam Families

C-type lysozyme/alpha-lactalbumin family

ClanCL0037Lysozyme

External Links

ECOD PDB View: 5OB6 RCSB PDB: 5OB6 PDBe: 5OB6 UniProt: P00698

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

pentakis(oxidaniumyl)-(oxidaniumylidynemethyl)rutheniumRU2

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.