ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xpcB1 - ECOD Domain | ECOD

ECOD/Domains/e5xpcB1

e5xpcB1

UID: 002096174

PDB

Range: B:44-130
PDB: 5XPC chain B(all domains)
UniProt: Q9V3H0 (all domains)
Gene: Drep4

Molecule: DNAation factor-related protein 4

3D Structure

Loading viewer...

Related Domains

Browse other domains in CIDE-N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyCIDE-N(221.1.1.10)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

CIDE-N domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5XPC RCSB PDB: 5XPC PDBe: 5XPC UniProt: Q9V3H0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure