ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mx2I1 - ECOD Domain | ECOD

ECOD/Domains/e5mx2I1

e5mx2I1

UID: 002097745

PDB

Range: I:1-33
PDB: 5MX2 chain I(all domains)
UniProt: Q8DJZ6 (all domains)
Gene: psbI

Molecule: Photosystem II reaction center protein I

3D Structure

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Related Domains

Browse other domains in PsbI →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center protein I, PsbI(5035)

HH-groupPhotosystem II reaction center protein I, PsbI(5035.1)

TT-groupPhotosystem II reaction center protein I, PsbI(5035.1.1)

FFamilyPsbI(5035.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll aCLA
EicosaneLFA
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE

Pfam Families

Photosystem II reaction centre I protein (PSII 4.8 kDa protein)

External Links

ECOD PDB View: 5MX2 RCSB PDB: 5MX2 PDBe: 5MX2 UniProt: Q8DJZ6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.