ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vohD3 - ECOD Domain | ECOD

ECOD/Domains/e5vohD3

e5vohD3

UID: 002098081

PDB

Range: D:120-240
PDB: 5VOH chain D(all domains)
UniProt: M5B0V2 (all domains)
Gene: LVISKB_1491

Molecule: NADH oxidase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
NADPHNDP
drugDrugBank DB02338

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5VOH RCSB PDB: 5VOH PDBe: 5VOH UniProt: M5B0V2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Chloride ion

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.