ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vj2B1 - ECOD Domain | ECOD

ECOD/Domains/e5vj2B1

e5vj2B1

UID: 002098995

PDB

Range: B:5-139
PDB: 5VJ2 chain B(all domains)
UniProt: X5FN71 (all domains)
Gene: NS1

Molecule: Non-structural protein 1

3D Structure

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Related Domains

Browse other domains in Pneumo_NS1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupEV matrix protein(54)

HH-groupEV matrix protein(54.1)

TT-groupNon-strctural protein 1(54.1.2)

FFamilyPneumo_NS1(54.1.2.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (1,4-Dioxane, Glycerin)

1,4-DioxaneDIO
DrugBank DB03316
GlycerinGOL

Pfam Families

PF03438Pneumo_NS1

Pneumovirus NS1 protein

External Links

ECOD PDB View: 5VJ2 RCSB PDB: 5VJ2 PDBe: 5VJ2 UniProt: X5FN71

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.