ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vrhA2 - ECOD Domain | ECOD

ECOD/Domains/e5vrhA2

e5vrhA2

UID: 002099002

PDB

Range: A:214-480
PDB: 5VRH chain A(all domains)
UniProt: P23930 (all domains)
Gene: lnt

Molecule: Apolipoprotein N-acyltransferase

3D Structure

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Related Domains

Browse other domains in CN_hydrolase →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupCarbon-nitrogen hydrolase(246.1)

TT-groupCarbon-nitrogen hydrolase(246.1.1)

FFamilyCN_hydrolase(246.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLB

Pfam Families

PF00795CN_hydrolase

Carbon-nitrogen hydrolase

External Links

ECOD PDB View: 5VRH RCSB PDB: 5VRH PDBe: 5VRH UniProt: P23930

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

Palmitic acidPLM

Shown in the structure viewer. Drug annotations from DrugDomain.