ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4aedB1 - ECOD Domain | ECOD

ECOD/Domains/e4aedB1

e4aedB1

UID: 002099180

RepresentativePDB

Range: B:10-254
PDB: 4AED chain B(all domains)
UniProt: A9X4C2 (all domains)

Molecule: VP2

3D Structure

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Related Domains

Browse other domains in Rhv →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv(10.2.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

picornavirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 4AED RCSB PDB: 4AED PDBe: 4AED UniProt: A9X4C2

Downloads

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