ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5kisA2 - ECOD Domain | ECOD

ECOD/Domains/e5kisA2

e5kisA2

UID: 002099324

PDB

Range: A:7-380,A:703-1484
PDB: 5KIS chain A(all domains)
UniProt: B6A880 (all domains)
Gene: yenB

Molecule: YenB

3D Structure

Loading viewer...

Related Domains

Browse other domains in SpvB,TcdB_toxin_midC,TcdB_toxin_midN →

Classification

AArchitecturebeta meanders(a.2)

XX-groupRearrangement hotspot (RHS) repeats protein(3735)

HH-groupRearrangement hotspot (RHS) repeats protein(3735.1)

TT-groupRearrangement hotspot (RHS) repeats protein(3735.1.1)

FFamilySpvB,TcdB_toxin_midC,TcdB_toxin_midN(3735.1.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

Salmonella virulence plasmid 65kDa B protein

PF12255TcdB_toxin_midC

Insecticide toxin TcdB middle/C-terminal region

ClanCL0877RHS_sf

PF12256TcdB_toxin_midN

Insecticide toxin TcdB middle/N-terminal region

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5KIS RCSB PDB: 5KIS PDBe: 5KIS UniProt: B6A880

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.