ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5npfA2 - ECOD Domain | ECOD

ECOD/Domains/e5npfA2

e5npfA2

UID: 002099549

PDB

Range: A:31-450
PDB: 5NPF chain A(all domains)
UniProt: F6BL85 (all domains)
Gene: Thexy_2211

Molecule: Glucosylceramidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydr_116N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupsupersandwich(12.3)

TT-groupsupersandwich(12.3.1)

FFamilyGlyco_hydr_116N(12.3.1.18)

Ligands

in contact, ≤ 4 Å

[(1~{R},2~{R},3~{R},4~{S},5~{R})-2-(hydroxymethyl)-3,4,5,6-tetrakis(oxidanyl)cyclohexyl] hydrogen sulfate945

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12215Glyco_hydr_116N

beta-glucosidase 2, glycosyl-hydrolase family 116 N-term

ClanCL0103Gal_mutarotase

External Links

ECOD PDB View: 5NPF RCSB PDB: 5NPF PDBe: 5NPF UniProt: F6BL85

Downloads

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