ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vygA1 - ECOD Domain | ECOD

ECOD/Domains/e5vygA1

e5vygA1

UID: 002099783

PDB

Range: A:46-84
PDB: 5VYG chain A(all domains)
UniProt: P00740 (all domains)
Gene: F9

Molecule: Coagulation factor IX

3D Structure

Loading viewer...

Related Domains

Browse other domains in EGF →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilyEGF(389.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

EGF-like domain

ClanCL0001EGF

External Links

ECOD PDB View: 5VYG RCSB PDB: 5VYG PDBe: 5VYG UniProt: P00740

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure