ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5w97c1 - ECOD Domain | ECOD

ECOD/Domains/e5w97c1

e5w97c1

UID: 002099893

PDB

Range: c:3-261
PDB: 5W97 chain c(all domains)
UniProt: P00415 (all domains)
Gene: MT-CO3

Molecule: Cytochrome c oxidase subunit 3

3D Structure

Loading viewer...

Related Domains

Browse other domains in COX3 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupCytochrome c oxidase subunit III-like(5039)

HH-groupCytochrome c oxidase subunit III-like(5039.1)

TT-groupCytochrome c oxidase subunit III-like(5039.1.1)

FFamilyCOX3(5039.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
Cholic AcidCHD
drugDrugBank DB02659
Decyl-beta-d-maltopyranoside

Pfam Families

Cytochrome c oxidase subunit III

External Links

ECOD PDB View: 5W97 RCSB PDB: 5W97 PDBe: 5W97 UniProt: P00415

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATEPEK

(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV

Shown in the structure viewer. Drug annotations from DrugDomain.