ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2iv2X1 - ECOD Domain | ECOD

ECOD/Domains/e2iv2X1

e2iv2X1

UID: 000000021

RepresentativePDB

Range: X:565-715
PDB: 2IV2 chain X(all domains)
UniProt: P07658 (all domains)
Gene: fdhF

Molecule: Formate dehydrogenase H

3D Structure

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Related Domains

Browse other domains in Molydop_binding →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyMolydop_binding(1.1.2.4)

Ligands

in contact, ≤ 4 Å

GUANYLATE-O'-PHOSPHORIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,5,6,7,8A,9,10,10A-OCTAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL) ESTER2MD
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEMGD
Molybdenum atom

Pfam Families

PF01568Molydop_binding

Molydopterin dinucleotide binding domain

ClanCL0199DPBB

External Links

ECOD PDB View: 2IV2 RCSB PDB: 2IV2 PDBe: 2IV2 UniProt: P07658

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.