ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xedC1 - ECOD Domain | ECOD

ECOD/Domains/e5xedC1

e5xedC1

UID: 002100186

PDB

Range: C:1-80
PDB: 5XED chain C(all domains)
UniProt: P00099 (all domains)
Gene: nirM

Molecule: Cytochrome c-552,Cytochrome c-551

3D Structure

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Related Domains

Browse other domains in Cytochrom_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C(107.1.1.1)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00034Cytochrom_C

Cytochrome c

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 5XED RCSB PDB: 5XED PDBe: 5XED UniProt: P00099

Downloads

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