ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m0mA1 - ECOD Domain | ECOD

ECOD/Domains/e5m0mA1

e5m0mA1

UID: 002101150

PDB

Range: A:55-95
PDB: 5M0M chain A(all domains)
UniProt: Q64610 (all domains)
Gene: Enpp2

Molecule: Ectonucleotide pyrophosphatase/phosphodiesterase family member 2

3D Structure

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Related Domains

Browse other domains in Somatomedin_B →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupSomatomedin B domain(920)

HH-groupSomatomedin B domain(920.1)

TT-groupSomatomedin B domain(920.1.1)

FFamilySomatomedin_B(920.1.1.1)

Ligands

in contact, ≤ 4 Å

[3,5-bis(chloranyl)phenyl]methyl (3~{R})-3-[[(4~{R})-4-[(3~{R},5~{S},7~{S},8~{R},9~{S},10~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-3,7-bis(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoyl]amino]pyrrolidine-1-carboxylate7CF
(2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoateNKP

Pfam Families

PF01033Somatomedin_B

Somatomedin B domain

External Links

ECOD PDB View: 5M0M RCSB PDB: 5M0M PDBe: 5M0M UniProt: Q64610

Downloads

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Thiocyanate ion

Shown in the structure viewer. Drug annotations from DrugDomain.