ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5sydB1 - ECOD Domain | ECOD

ECOD/Domains/e5sydB1

e5sydB1

UID: 002101317

PDB

Range: B:1-88,B:94-131
PDB: 5SYD chain B(all domains)
UniProt: P00282 (all domains)
Gene: azu

Molecule: Azurin, chimeric construct

3D Structure

Loading viewer...

Related Domains

Browse other domains in Copper-bind →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupCupredoxin-like(3156)

HH-groupCupredoxin-related(3156.1)

TT-groupCupredoxin-related(3156.1.1)

FFamilyCopper-bind(3156.1.1.3)

Ligands

in contact, ≤ 4 Å

COPPER (II) IONCU
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00127Copper-bind

Copper binding proteins, plastocyanin/azurin family

ClanCL0026CU_oxidase

External Links

ECOD PDB View: 5SYD RCSB PDB: 5SYD PDBe: 5SYD UniProt: P00282

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure