ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5szbA1 - ECOD Domain | ECOD

ECOD/Domains/e5szbA1

e5szbA1

UID: 002101320

PDB

Range: A:254-317
PDB: 5SZB chain A(all domains)
UniProt: Q92784 (all domains)
Gene: DPF3

Molecule: Zinc finger protein DPF3

3D Structure

Loading viewer...

Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 5SZB RCSB PDB: 5SZB PDBe: 5SZB UniProt: Q92784

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure