ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vyzB6 - ECOD Domain | ECOD

ECOD/Domains/e5vyzB6

e5vyzB6

UID: 002101549

PDB

Range: B:482-821
PDB: 5VYZ chain B(all domains)

Molecule: Pyruvate carboxylase

3D Structure

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Related Domains

Browse other domains in HMGL-like →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHMGL-like(2002.1.1.25)

Ligands

in contact, ≤ 4 Å

(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide2BA
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00682HMGL-like

HMGL-like

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5VYZ RCSB PDB: 5VYZ PDBe: 5VYZ

Downloads

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