ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w0rB3 - ECOD Domain | ECOD

ECOD/Domains/e5w0rB3

e5w0rB3

UID: 002101602

PDB

Range: B:1013-1181
PDB: 5W0R chain B(all domains)
UniProt: Q9GZX7 (all domains)
Gene: AICDA

Molecule: MBP fused activation-induced cytidine deaminase

3D Structure

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Related Domains

Browse other domains in APOBEC_N →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilyAPOBEC_N(2492.1.1.14)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Zinc ionZN
metal

+ 1 additive (Cacodylate ion)

Cacodylate ion

Pfam Families

Activation-induced cytidine deaminase (AID)

ClanCL0109CDA

External Links

ECOD PDB View: 5W0R RCSB PDB: 5W0R PDBe: 5W0R UniProt: Q9GZX7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.