ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w0uB2 - ECOD Domain | ECOD

ECOD/Domains/e5w0uB2

e5w0uB2

UID: 002101607

PDB

Range: B:1013-1181
PDB: 5W0U chain B(all domains)
UniProt: P0AEY0 (all domains)
Gene: malE

Molecule: Maltose-binding periplasmic protein,Single-stranded DNA cytosine deaminase

3D Structure

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Related Domains

Browse other domains in APOBEC_N →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilyAPOBEC_N(2492.1.1.14)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine-5'-MonophosphateDCM
drugDrugBank DB03798
Calcium ionCA
metal
Zinc ion

Pfam Families

Activation-induced cytidine deaminase (AID)

ClanCL0109CDA

External Links

ECOD PDB View: 5W0U RCSB PDB: 5W0U PDBe: 5W0U UniProt: P0AEY0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.