ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wo1B1 - ECOD Domain | ECOD

ECOD/Domains/e5wo1B1

e5wo1B1

UID: 002101818

PDB

Range: B:29-123
PDB: 5WO1 chain B(all domains)
UniProt: P77754 (all domains)
Gene: spy

Molecule: Periplasmic chaperone Spy

3D Structure

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Related Domains

Browse other domains in LTXXQ →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLTXXQ motif family protein(3711)

HH-groupLTXXQ motif family protein(3711.1)

TT-groupLTXXQ motif family protein(3711.1.1)

FFamilyLTXXQ(3711.1.1.1)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142within 5 Å only
Chloride ionCL
Zinc ionZN

Pfam Families

LTXXQ motif family protein

ClanCL0515LTXXQ-like

External Links

ECOD PDB View: 5WO1 RCSB PDB: 5WO1 PDBe: 5WO1 UniProt: P77754

Downloads

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metal

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.