ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wolA2 - ECOD Domain | ECOD

ECOD/Domains/e5wolA2

e5wolA2

UID: 002101827

PDB

Range: A:108-211
PDB: 5WOL chain A(all domains)
UniProt: P24703 (all domains)
Gene: dapB

Molecule: 4-hydroxy-tetrahydrodipicolinate reductase

3D Structure

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Related Domains

Browse other domains in DapB_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyDapB_C(298.1.1.9)

Ligands

in contact, ≤ 4 Å

Picolinic acid6PC
drugDrugBank DB05483
Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461within 5 Å only

Pfam Families

Dihydrodipicolinate reductase, C-terminus

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 5WOL RCSB PDB: 5WOL PDBe: 5WOL UniProt: P24703

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Sulfate ion, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL)

Sulfate ionSO4
DrugBank DB14546
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOLPE3

Shown in the structure viewer. Drug annotations from DrugDomain.