ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o1lB1 - ECOD Domain | ECOD

ECOD/Domains/e5o1lB1

e5o1lB1

UID: 002102665

PDB

Range: B:31-403
PDB: 5O1L chain B(all domains)
UniProt: Q3L8N0 (all domains)
Gene: lcp

Molecule: Rubber oxygenase

3D Structure

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Related Domains

Browse other domains in MPAB_Lcp_cat →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyMPAB_Lcp_cat(106.1.1.6)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267

+ 3 additives (Imidazole, (R,R)-2,3-BUTANEDIOL, 1,2-ETHANEDIOL)

ImidazoleIMD
DrugBank DB03366

Pfam Families

PF09995MPAB_Lcp_cat

ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain

ClanCL0090Globin

External Links

ECOD PDB View: 5O1L RCSB PDB: 5O1L PDBe: 5O1L UniProt: Q3L8N0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(R,R)-2,3-BUTANEDIOL

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.