ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nz8B2 - ECOD Domain | ECOD

ECOD/Domains/e5nz8B2

e5nz8B2

UID: 002102676

PDB

Range: B:426-898
PDB: 5NZ8 chain B(all domains)
UniProt: Q93HT8 (all domains)
Gene: cdp-ym4

Molecule: Cellodextrin phosphorylase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_36 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_36(109.2.1.36)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17167Glyco_hydro_94

Glycosyl hydrolase 94 superfamily, catalytic domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 5NZ8 RCSB PDB: 5NZ8 PDBe: 5NZ8 UniProt: Q93HT8

Downloads

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