ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w8cA1 - ECOD Domain | ECOD

ECOD/Domains/e5w8cA1

e5w8cA1

UID: 002104046

PDB

Range: A:-1-209
PDB: 5W8C chain A(all domains)

Molecule: Autoinducer synthase

3D Structure

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Related Domains

Browse other domains in Autoind_synth →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyAutoind_synth(213.1.1.3)

Ligands

in contact, ≤ 4 Å

5'-S-methyl-5'-thioadenosineMTA
drugDrugBank DB02282
Chloride ionCL
Isovaleryl-coenzyme AIVC

Pfam Families

PF00765Autoind_synth

Autoinducer synthase

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 5W8C RCSB PDB: 5W8C PDBe: 5W8C

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.