ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xf9D1 - ECOD Domain | ECOD

ECOD/Domains/e5xf9D1

e5xf9D1

UID: 002104079

PDB

Range: D:14-58,D:429-468
PDB: 5XF9 chain D(all domains)
UniProt: A0A077LAI5 (all domains)
Gene: hoxH

Molecule: NAD-reducing hydrogenase

3D Structure

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Related Domains

Browse other domains in HoxH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyHoxH(244.4.1.4)

Ligands

in contact, ≤ 4 Å

NICKEL (III) ION3NI
metal
CARBONMONOXIDE-(DICYANO) IRONFCO
Magnesium ionMG

Pfam Families

HoxL-like

External Links

ECOD PDB View: 5XF9 RCSB PDB: 5XF9 PDBe: 5XF9 UniProt: A0A077LAI5

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.