ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xf9H3 - ECOD Domain | ECOD

ECOD/Domains/e5xf9H3

e5xf9H3

UID: 002104085

PDB

Range: H:15-58,H:429-468
PDB: 5XF9 chain H(all domains)
UniProt: A0A077LAI5 (all domains)
Gene: hoxH

Molecule: NAD-reducing hydrogenase

3D Structure

Loading viewer...

Related Domains

Browse other domains in HoxH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyHoxH(244.4.1.4)

Ligands

in contact, ≤ 4 Å

NICKEL (III) ION3NI
metal
CARBONMONOXIDE-(DICYANO) IRONFCO
Magnesium ionMG

Pfam Families

HoxL-like

External Links

ECOD PDB View: 5XF9 RCSB PDB: 5XF9 PDBe: 5XF9 UniProt: A0A077LAI5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.