ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xfaD2 - ECOD Domain | ECOD

ECOD/Domains/e5xfaD2

e5xfaD2

UID: 002104094

PDB

Range: D:17-58,D:429-468
PDB: 5XFA chain D(all domains)
UniProt: A0A077LAI5 (all domains)
Gene: hoxH

Molecule: NAD-reducing hydrogenase

3D Structure

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Related Domains

Browse other domains in HoxH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyHoxH(244.4.1.4)

Ligands

in contact, ≤ 4 Å

CARBONMONOXIDE-(DICYANO) IRONFCO
Magnesium ionMG
metal
NICKEL (II) IONNI

Pfam Families

HoxL-like

External Links

ECOD PDB View: 5XFA RCSB PDB: 5XFA PDBe: 5XFA UniProt: A0A077LAI5

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.