ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vitV1 - ECOD Domain | ECOD

ECOD/Domains/e5vitV1

e5vitV1

UID: 002104800

PDB

Range: V:224-554
PDB: 5VIT chain V(all domains)
UniProt: Q9I6T0 (all domains)
Gene: mdcA

Molecule: MdcA

3D Structure

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Related Domains

Browse other domains in Mal_decarbox_Al →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilyMal_decarbox_Al(2003.1.7.12)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16957Mal_decarbox_Al

Malonate decarboxylase, alpha subunit, transporter

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5VIT RCSB PDB: 5VIT PDBe: 5VIT UniProt: Q9I6T0

Downloads

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