ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nfvA2 - ECOD Domain | ECOD

ECOD/Domains/e5nfvA2

e5nfvA2

UID: 002105212

PDB

Range: A:0-46,A:762-892
PDB: 5NFV chain A(all domains)
UniProt: A0Q7Q2 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cpf1

3D Structure

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Related Domains

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Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-DiolB3P
drugDrugBank DB02676
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

External Links

ECOD PDB View: 5NFV RCSB PDB: 5NFV PDBe: 5NFV UniProt: A0Q7Q2

Downloads

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