ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xtcp1 - ECOD Domain | ECOD

ECOD/Domains/e5xtcp1

e5xtcp1

UID: 002105897

PDB

Range: p:8-179
PDB: 5XTC chain p(all domains)
UniProt: Q9Y6M9 (all domains)
Gene: NDUFB9

Molecule: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9

3D Structure

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Related Domains

Browse other domains in Complex1_LYR →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLYR protein(1128)

HH-groupLYR protein(1128.1)

TT-groupLYR protein(1128.1.1)

FFamilyComplex1_LYR(1128.1.1.1)

Ligands

in contact, ≤ 4 Å

S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate8Q1

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05347Complex1_LYR

Complex 1 protein (LYR family)

ClanCL0491LYR-like

External Links

ECOD PDB View: 5XTC RCSB PDB: 5XTC PDBe: 5XTC UniProt: Q9Y6M9

Downloads

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