ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m0yA1 - ECOD Domain | ECOD

ECOD/Domains/e5m0yA1

e5m0yA1

UID: 002114415

PDB

Range: A:16-188
PDB: 5M0Y chain A(all domains)
UniProt: A3DF10 (all domains)
Gene: Cthe_1307

Molecule: Cellulosome anchoring protein cohesin region

3D Structure

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Related Domains

Browse other domains in Cohesin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyCohesin(11.1.5.9)

Ligands

in contact, ≤ 4 Å

Hexaethylene glycolP6G

+ 3 additives (Triethylene glycol, Sulfate ion, 1,2-ETHANEDIOL)

Triethylene glycolPGE
DrugBank DB02327
Sulfate ionSO4

Pfam Families

PF00963Cohesin

Cohesin domain

ClanCL0203CBD

External Links

ECOD PDB View: 5M0Y RCSB PDB: 5M0Y PDBe: 5M0Y UniProt: A3DF10

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546within 5 Å only

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.