ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ocsA1 - ECOD Domain | ECOD

ECOD/Domains/e5ocsA1

e5ocsA1

UID: 002114449

PDB

Range: A:1-369
PDB: 5OCS chain A(all domains)
UniProt: Q1LDQ5 (all domains)
Gene: Rmet_4859

Molecule: Putative NADH-depentdent flavin oxidoreductase

3D Structure

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Related Domains

Browse other domains in Oxidored_FMN →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOxidored_FMN(2002.1.1.32)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

PF00724Oxidored_FMN

NADH:flavin oxidoreductase / NADH oxidase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5OCS RCSB PDB: 5OCS PDBe: 5OCS UniProt: Q1LDQ5

Downloads

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Drug annotations from DrugDomain.