ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ov6A3 - ECOD Domain | ECOD

ECOD/Domains/e5ov6A3

e5ov6A3

UID: 002114497

PDB

Range: A:1-39,A:61-100,A:198-218
PDB: 5OV6 chain A(all domains)
UniProt: Q8GCA8 (all domains)
Gene: hemC

Molecule: Porphobilinogen deaminase

3D Structure

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Related Domains

Browse other domains in Porphobil_deam →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyPorphobil_deam(7523.1.1.6)

Ligands

in contact, ≤ 4 Å

3-[4-(2-hydroxy-2-oxoethyl)-2,5-dimethyl-1~{H}-pyrrol-3-yl]propanoic acidAWQ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01379Porphobil_deam

Porphobilinogen deaminase, dipyromethane cofactor binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 5OV6 RCSB PDB: 5OV6 PDBe: 5OV6 UniProt: Q8GCA8

Downloads

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